2024

León, F., Pizarro, E., Noll, D., Pertierra, L. R., Parker, P., Espinaze, M. P., … & Vianna, J. A. (2024). Comparative genomics supports ecologically induced selection as a putative driver of banded penguin diversification. Molecular Biology and Evolution, 41(9), msae166.

Rivero de Aguilar, J., Barroso, O., Bonaccorso, E., Cadena, H., Hussing, L., Jorquera, J., … & Wingfield, J. C. (2024). Associations among MHC genes, latitude, and avian malaria infections in the rufous‐collared sparrow (Zonotrichia capensis). Ecology and Evolution, 14(7), e11634.

Nespolo, R. F., Quintero-Galvis, J. F., Fontúrbel, F. E., Cubillos, F. A., Vianna, J., Moreno-Meynard, P., … & Bozinovic, F. (2024). Climate change and population persistence in a hibernating marsupial. Proceedings B, 291(2025), 20240266.

León, F., Pizarro, E. J., Noll, D., Pertierra, L. R., Gonzalez, B. A., Johnson, W. E., … & Vianna, J. A. (2024). History of Diversification and Adaptation from North to South Revealed by Genomic Data: Guanacos from the Desert to Sub-Antarctica. Genome Biology and Evolution, 16(5), evae085.

Varela, A. I., Brokordt, K., Vianna, J. A., Frugone, M. J., Ismar-Rebitz, S. M., Gaskin, C. P., … & Luna-Jorquera, G. (2024). Are threatened seabird colonies of the pacific ocean genetically vulnerable? The case of the red-tailed tropicbird, Phaethon rubricauda, as a model species. Biodiversity and Conservation, 33(3), 1165-1184.

León, F., Le Bohec, C., Pizarro, E. J., Baille, L., Cristofari, R., Houstin, A., … & Vianna, J. A. (2024). Highly pathogenic avian influenza a (H5N1) suspected in penguins and shags on the Antarctic peninsula and West Antarctic coast. bioRxiv, 2024-03.

Pertierra, L. R., Varliero, G., Barbosa, A., Biersma, E. M., Convey, P., Chown, S. L., Cowan, D., De Los Rios, A., Escribano-Alvarez, P., Fontaneto, D., Fraser, C., Harris, M., Hughes, K., Griffiths, H., le Roux, P., Liu, X. P., Lynch, H., Majewska, R., Martinez, P. A., Molina-Montenegro, M., … Greve, M. (2024). TerrANTALife 1.0 Biodiversity data checklist of known Antarctic terrestrial and freshwater life forms. Biodiversity data journal, 12, e106199. https://doi.org/10.3897/BDJ.12.e106199

Pizarro, E. J., Julio-Kalajžić, B., Sallaberry-Pincheira, N., Muñoz, V., González-Acuña, D., Cabello, J., … & Vianna, J. A. (2024). Species delimitation and intraspecific diversification in recently diverged South American foxes. Mammal Research, 69(1), 71-87.

2023

Krüger, L., Vianna, J. A., Le Bohec, C., & Cárdenas, C. A. (2023). A tipping point in West Antarctica in 2023’s circumpolar 5-sigma event? a glimpse from the emperor penguin’s perspective. bioRxiv, 2023-09.

Lagos, N., Villalobos, R., Vianna, J. A., Espinosa-Miranda, C., Rau, J. R., & Iriarte, A. (2023). The spatial and trophic ecology of culpeo foxes (Lycalopex culpaeus) in the high Andes of northern Chile. Studies on Neotropical Fauna and Environment, 58(3), 564-573.

Pertierra, L. R., Varliero, G., Harris, M., Majewska, R., Escribano-Alvarez, P., Ríos, A. D. L., … Hortal, J. (2023). TerrANTALife: Biodiversity data checklist of known Antarctic terrestrial and freshwater life forms [Data set]. Digital.CSIC. http://doi.org/10.20350/DIGITALCSIC/15250

2022

Trevine, V. C., Grazziotin, F. G., Giraudo, A., Sallaberry-Pincheira, N., Vianna, J. A., & Zaher, H. (2022). The systematics of Tachymenini (Serpentes, Dipsadidae): An updated classification based on molecular and morphological evidence. Zoologica Scripta, 51(6), 643-663. https://doi.org/10.1111/zsc.12565

de Ferran, V., Figueiró, H. V., de Jesus Trindade, F., Smith, O., Sinding, M. H. S., Trinca, C. S., Zenato, G., Veron, G., Vianna, J. A., … & Eizirik, E. (2022). Phylogenomics of the world’s otters. Current Biology, 32(16), 3650-3658.

Álvarez-Varas, R., Medrano, C., Benítez, H. A., Guerrero, F., León Miranda, F., Vianna, J. A., … & Véliz, D. (2022). Genetics, morphometrics and health characterization of green turtle foraging grounds in mainland and insular Chile. Animals, 12(12), 1473.

Barros, M., Pons, D. J., Moreno, A., Vianna, J., Ramos, B., Dueñas, F., … & Medina-Vogel, G. (2022). Domestic dog and alien North American mink as reservoirs of infectious diseases in the endangered Southern river otter. Austral journal of veterinary sciences, 54(2), 65-75.

Daly Noll, Fabiola Leon, Debora Brandt, Pierre Pistorius, Céline Le Bohec, Francesco Bonadonna, Phil N. Trathan, Andrés Barbosa, Andrea Raya-Rey, Gisele P.M. Dantas, Rauri C.K. Bowie, Elie Poulin, Juliana A. Vianna. Positive selection on mitogenomes driving the diversification of gentoo penguins in response to adaptation in isolation. Scientific Reports. 12, 3767. doi.org/10.1038/s41598-022-07562-0

Fiddaman SR, Vinkler M, Levy H, Dimopoulos EA, Vianna JA, Cole TL, Pan H, Fang M, Zhang G, Frantz LA, Hart T, Smith AL. Positive selection and an incipient, genus-wide pseudogenization event in penguin Toll-like receptors. Molecular Biology and Evolution. doi: 10.1093/molbev/msab354

2021

Jaime R. Rau, Nicolás Lagos, Rodrigo Villalobos, Juliana A. Vianna, Cayetano Espinosa-Miranda, Agustín Iriarte. The spatial and trophic ecology of culpeo foxes (Lycalopex culpaeus) in the high Andes of northern Chile. Studies on Neotropical Fauna and Environment. doi:10.1080/01650521.2021.2005393

Sree Rohit Raj Kolora, Gregory L. Owens, Alexander Stubbs, Kamalakar Chatla, Connor Jainese, Katelin Seeto, Merit McCrea, Juliana A. Vianna, Doris Bachtrog, Katherine Maslenikov, James Orr, Milton Love, Peter H. Sudmant. Origins and evolution of extreme lifespan in the adaptive radiation of Pacific rockfishes. Science. 374 (6569): 842-847. DOI: 10.1126/science.abg5332

Pizarro, E., Mora, M., Medina-Vogel, G., Vianna JA. Surviving despite reduce MHC variation: selection patterns and genetic variation of the endangered Huillín (Lontra provocax). Mammal Research. Mammal Research 66(4). DOI: 10.1007/s13364-021- 00594-3

Weinberg C, Vianna JA, Marquet P, Faugeron S. The South American sea lion, Otaria flavescens, is genetically structured by historical climate changes and contemporary dynamics. Diversity and Distribution. https://doi.org/10.1111/ddi.13421

Frugone MJ, Cole TL, López ME, Clucas G, Matos-Maraví P, Lois NA, Pistorius P, Bonadonna F, Trathan P, Polanowski A, Wienecke B, Raya-Rey A, Pütz K, Steinfurth A, Bi K, Y. Wang-Claypool C, Bowie RCK, Waters JM, Poulin E, Vianna JA. Taxonomy based on limited genomic markers may underestimate species diversity of rockhopper penguins and threaten their conservation. Diversity and Distribution. https://doi.org/10.1111/ddi.13399

Klemens Pütz, Camila Gherardi-Fuentes, Pablo García-Borboroglu, Claudia Godoy, Marco Flagg, Julieta Pedrana, Juliana Vianna, Alejandro Simeone, Benno Lüthi. Exceptional Foraging Plasticity In King Penguins (Aptenodytes patagonicus) From a Recently Established Breeding Site In Tierra Del Fuego, Chile. Global Ecology and Conservation. Volume 28, August 2021, e01669. https://doi.org/10.1016/j.gecco.2021.e01669

Sophia Di Cataldo, Aitor Cevidanes, Dr; Claudia Ulloa-Contreras; Irene Sacristán; Ezequiel Hidalgo-Hermoso; Valeria Gargano; Nicole Sallaberry-Pincheira; Diego Peñaloza-Madrid; Daniel González-Acuña; Constanza Napolitano; Juliana Vianna; Gerardo Acosta-Jamett; Domenico Vicari; Javier Millán. Mapping the distribution and risk factors of Anaplasmataceae in wild and domestic canines in Chile using molecular and serological methods. Ticks and Tick-borne Diseases. 2021, 12(5):101752 DOI: 10.1016/j.ttbdis.2021.101752

Sophia Di Cataldo, Aitor Cevidanes, Claudia Ulloa-Contreras, Irene Sacristán, Diego Peñaloza-Madrid, Juliana Vianna, Daniel González-Acuña, Nicole SallaberryPincheira, Javier Cabello, Constanza Napolitano, Ezequiel Hidalgo-Hermoso, Gerardo Acosta-Jamett, Javier Millán. Widespread Infection with Hemotropic Mycoplasmas in Free-Ranging Dogs and Wild Foxes Across Six Bioclimatic Regions of Chile. Microorganisms. 2021 Apr 24;9(5):919. doi: 10.3390/microorganisms9050919.

Doussang D, Sallaberry-Pincheira N, Cabanne GS, Lijtmaer DA, González-Acuña D, Vianna JA. Specialist versus Generalists parasites: the interaction between host diversity, environment and geographic barriers in avian malaria. International Journal for Parasitology. Available online 25 May 2021. https://doi.org/10.1016/j.ijpara.2021.04.003

Rocío Álvarez-Varas, Noemi Rojas-Hernández, Maike Heidemeyer, Cynthia Riginos, Hugo A. Benítez, Raúl Araya-Donoso, Eduardo Reséndiz, Mónica Lara-Uc, Daniel A. Godoy, Juan Pablo Muñoz-Pérez, Daniela E. Alarcón-Ruales, Joanna Alfaro-Shigueto, Clara Ortiz-Alvarez, Jeffrey C. Mangel, Juliana A. Vianna and David Véliz. 2021. Green, yellow or black? Genetic differentiation and adaptation signatures in a highly migratory marine turtle. Proceedings of the Royal Society B. 288 (1954) https://doi.org/10.1098/rspb.2021.0754

Acosta, I., Cabanne, G.S., Noll, D. et al. Patagonian glacial effects on the endemic Green-backed Firecrown, Sephanoides sephaniodes (Aves: Trochilidae): evidence from species distribution models and molecular data. J Ornithol (2020). https://doi.org/10.1007/s10336-020-01822-4

Alvarez-Varas R, Heidemeyer M, Riginos C, Benitez H, Reséndiz E, Lara-Uc M, Godoy D, Muñoz-Pérez J, Alarcón-Ruales D, Vélez-Rubio G, Fallabrino A, Piovano S, AlfaroShigueto J, Ortiz-Álvarez C, Mangel J, Esquerre D, Zárate P, Medrano C, Vianna JA, Veliz D. 2021. Integrating morphological and genetic data at different spatial scales in a cosmopolitan marine turtle species: challenges for management and conservation. Zoological Journal of Linnean Society. 191(2):434–453, https://doi.org/10.1093/zoolinnean/zlaa066

2020

Juliana A. Vianna, Flávia A. N. Fernandes, María José Frugone, Henrique V. Figueiró, Luis R. Pertierra, Daly Noll, Ke Bi, Cynthia Y. Wang-Claypool, Andrew Lowther, Patricia Parker, Celine Le Bohec, Francesco Bonadonna, Barbara Wienecke, Pierre Pistorius, Antje Steinfurth, Christopher P. Burridge, Gisele P. M. Dantas, Elie Poulin, W. Brian Simison, Jim Henderson, Eduardo Eizirik, Mariana F. Nery & Rauri C. K. Bowie. 2020. Genome-wide analyses reveal drivers of penguin diversification. PNAS. www.pnas.org/cgi/doi/10.1073/pnas.2006659117

Pertierra LR, Segovia NI, Noll D, Martinez PA, Pliscoff P, Barbosa A, Aragón P, Raya Rey A, Pistorius P, Trathan P, Polanowski A, Bonnadonna F, Le Bohec C, Bi K, Wang-Claypool CY, Gonzalez-Acuña D, Dantas GPM, Bowie RCK, Poulin E, Vianna JA. 2020. Cryptic speciation in gentoo penguins is driven by geographic isolation and regional marine conditions: unforeseen vulnerabilities to global change. Diversity and distribution. DOI: 10.1111/ddi.13072

Lois NA,  Campagna L, Balza U, Polito MJ, Pütz K, Vianna JA, Morgenthaler A, Frere E, Sáenz‐Samaniego R, Raya Rey A, Mahler B. 2020. Metapopulation dynamics and foraging plasticity in a highly vagile seabird, the southern rockhopper penguin. Ecology and Evolution. 10(7): 3346-3355.

Cuevas E., Vianna J.A., Botero-Delgadillo E., Doussang E., González-Acuña D., Barroso O., Rozzi R., Vásquez R.A., Quirici V. (2020) Latitudinal gradients of haemosporidian parasites: Prevalence, diversity and drivers of infection in the Thorn-tailed Rayadito (Aphrastura spinicauda), International Journal for Parasitology: Parasites and Wildlife, 11: 1-11, https://doi.org/10.1016/j.ijppaw.2019.11.002.

González B.A., Agapito A.M., Novoa-Muñoz F., Vianna J., Johnson W.E., Marín J.C. (2020) Utility of genetic variation in coat color genes to distinguish wild, domestic and hybrid South American camelids for forensic and judicial applications. Forensic Science International: Genetics, 45, 102226, https://doi.org/10.1016/j.fsigen.2019.102226.

Levy H., Fiddaman S.R., Vianna J.A., Noll D., Clucas G.V, Sidhu J.K.H., Polito M.J., Bost C.A., Phillips R.A., Crofts S., Miller G.D., Pistorius P., Bonnadonna F., Le Bohec C., Barbosa A.A., Trathan P., Raya Rey A, Frantz L.A.F., Hart T, Smith A.L., Evidence of pathogen-induced immunogenetic selection across the large geographic range of a wild seabird, Molecular Biology and Evolution, , msaa040, https://doi.org/10.1093/molbev/msaa040

2019

Cole T.L., Dutoit L., Dussex N., Hart H., Alexander A:, Younger J.L., Clucas G.V., Frugone M.J., Cherel Y., Cuthbert R., Ellenberg U. , Fiddaman S.R., Hiscock J., Houston D., Jouventin P., Mattern T., Miller G., Miskelly C., Nolan P., Polito M.J., Quillfeldt P., Ryan P.G., Smith A., Tennyson A.J.D., Thompson D., Wienecke B., Vianna J.A., Waters J.M. (2019) Receding ice drove parallel expansions in Southern Ocean penguins. Proceedings of the National Academy of Sciences Dec 2019, 116(52): 26690-26696; DOI: 10.1073/pnas.1904048116

Doussang, D., González-Acuña, D., Torres-Fuentes, L.G., Stephen C. Lougheed S.C., Clemente-Carvalho R.B., Kian Greene K. C., Vianna J.A. (2019) Spatial distribution, prevalence and diversity of haemosporidians in the rufous-collared sparrow, Zonotrichia capensis. Parasites Vectors 12:2. https://doi.org/10.1186/s13071-018-3243-4

Frugone, M. J., López, M. E., Segovia, N. I., Cole, T. L., Lowther, A., Pistorius, P.,  & Polanowski, A. Wieneckeo B., Bi K., Wang-Claypool C.Y., Watersg J.M., Bowie R.C.K, Poulin E:, Vianna J.A. (2019). More than the eye can see: Genomic insights into the drivers of genetic differentiation in Royal/Macaroni penguins across the Southern Ocean. Molecular phylogenetics and evolution, 139, 106563.

Dantas G.P.M.,Oliveira L.R., Santos A.M., Flores M.D.,de Melo D.R.,Simeone A., González-Acuña D., Luna-Jorquera D., Le Bohec C., Valdés-Velásquez A., Cardeña M., Morgante S.J., Vianna J.A. (2019) Uncovering population structure in the Humboldt penguin (Spheniscus humboldti) along the Pacific coast at South America. PLoS ONE 14(5): e0215293. https://doi.org/10.1371/journal.pone.0215293

2018

Frugone, M. J., Lowther, A., Noll, D., Ramos, B., Pistorius, P., Dantas,G. P. M. Dantas, M. V. Petry, F. Bonadonna, A. Steinfurth, A. Polanowski, A. Raya Rey, N. A. Lois, K. Pütz, P. Trathan, B. Wienecke, E. Poulin & J. A. Vianna (2018). Contrasting phylogeographic pattern among Eudyptes penguins around the Southern Ocean. Scientific reports, 8(1), 17481.

Alvares-Varas R, Morales-Moraga D, González-Acuña D, Klarian SA, Vianna JA. 2018. Mercury exposure in Humboldt (Spheniscus humboldti) and chinstrap (Pygoscelis antarctica) penguins throughout Chilean coast and Antarctica. Archives of Environmental Contamination and Toxicology. 75(1):75-86. doi: 10.1007/s00244-018-0529

Isidora Mura-Jornet; Carolina Pimentel; Gisele PM Dantas; María Virginia Petry; Daniel González-Acuña; Andrés Barbosa; Andrew D Lowther; Kit M Kovacs; Elie Poulin; Juliana A. Vianna. 2018. Chinstrap penguin population structure: one or more populations along the Southern Ocean? BMC Evolutionary Biology.  Mura-Jornet et al. BMC Evolutionary Biology. 18:90. https://doi.org/10.1186/s12862-018-1207-0

Dantas GPM, Maria GC, Marasco ACM, Castro LT, Almeida VS, Santos FR, Oliveira LR, Crespo E,  Frere E, Milliones C, González‑Acuña D, Morgante JS, Vianna JA. 2018. Demographic history of the Magellanic Penguin (Spheniscus magellanicus) on the Pacific and Atlantic coasts of South America. 1-13. https://doi.org/10.1007/s10336-018-1538-z

Ramos B., González-Acuña D., Loyola, D.E., Johnson W.E., P. G. Parker, M. Massaro, G. P. M. Dantas, M. D. Miranda, J. A. Vianna. 2018. Landscape genomics: natural selection drives the evolution of mitogenome in penguins. BMC Genomics. 19:53.

2017

Retamal P, Llanos-Soto S, Moreno Salas L, López J, Vianna JA, Hernández J, Medina-Vogel G, Castañeda F, Fresno M, González-Acuña D. 2017. Isolation of drug-resistant Salmonella enterica serovar enteritidis strains in gentoo penguins from Antarctica. Polar Biology. 40(12):2531-2536

Vianna JA, Noll D, Mura-Jornet I, Valenzuela-Guerra P, González-Acuña D, Navarro C, Loyola DE, Dantas GPM. 2017. Comparative genome-wide polymorphic microsatellite markers in Antarctic penguins via next generation sequencing. Genetics and Molecular Biology. 40 (3):676-687.

Álvarez-Varas R, Contardo J, Heidemeyer M, Forero-Rozo L, Brito B, Cortés V, Brain MJ, Pereira S, Vianna JA. 2017. health and genetic characterization of the southernmost green turtle (Chelonia mydas) aggregation in the Eastern Pacific: implications for local conservation strategies. Lat. Am. J. Aquat. Res., 45(3): 540-554.

Vianna JA, Noll D, Dantas GPM, Petry MV, Barbosa A, González-Acuña D, Le Bohec C, Bonnadona F, Poulin E. 2017. Marked phylogeographic structure of Gentoo penguin reveals an ongoing diversification process along the Southern Ocean. Molecular Phylogenetics and Evolution. 107: 486-498.

Vianna JA, Noll D, Moreno L, Silva C, Muñoz-Leal S, Najle M, González-Acuña D. 2017. Record of an alleged extinct rodent: molecular analyses of the endemic Octodon pacificus from Chile. Journal of Mammalogy, 98(2):456-463.

2016

Sallaberry-Pincheira N, González-Acuña D, Padilla P, Dantas GPM, Luna-Jorquera G, Frere E, Valdés-Velásquez A, Vianna JA. 2016. Contrasting patterns of selection between MHC I and II across populations of Humboldt and Magellanic penguins. Ecology and Evolution, 6(20):7498-7510.

Santos FA, Morgante JS, Frere E, Milliones A, Sander M, Vianna JA, Dantas GPM.Evolutionary History Of The Kelp Gull (Larus dominicanus) At The South Hemisphere Supported By Multilocus Evidence. Journal of Ornithology. 157: 1103.

Rivera DS, Vianna JA, Ebensperger LA, Palma RE. 2016. Phylogeography and demographic history of the Andean degu, Octodontomys gliroides (Rodentia: Octodontidae) based on mitochondrial DNA. Zoological Journal of the Linnean Society. 178(2):410–430.

2015

Álvarez-Varas R, González-Acuña D, Vianna JA. 2015. Comparative phylogeography and morphological variation of co-distributed Phrygilus species (Birds, Thraupidae) from Central Andes. Molecular Phylogenetics and Evolution. 90: 150-163.

Sallaberry-Pincheira N, Gonzalez-Acuña D, Herrera-Tello Y, Dantas GPM, Luna-Jorquera G, Frere E, Valdés-Velasquez A, Simeone A, Vianna JA. 2015. Molecular epidemiology of avian malaria in wild breeding colonies of Humboldt and Magellanic penguins in South America. Ecohealth. 12(2):267-77.

2014

Vianna JA, Cortes M, Ramos B, Sallaberry-Pincheira N, González-Acuña D, Dantas GPM, Morgante J, Simeone A, Luna-Jorquera G. 2014. Changes in abundance and distribution of the humboldt penguin Spheniscus humboldti. Marine Ornithology. 42: 153-159

Peña FM, Poulin E, Dantas GPM, González-Acuña D, Petry MV, Vianna, JA. 2014. Have Historical Climate Changes Affected Gentoo Penguin (Pygoscelis papua) Populations in Antarctica? Plos One. 9(4):1-8.

Marín JC, Orozco-terWengel P, Romero K, Vásquez JP, Varas V, Vianna JA. 2014. Cross-amplification of nonspecific microsatellites markers: an useful tool to study endangered/vulnerable species of southern Andes deer. Genetics and Molecular Research 13 (2): 3193-3200.

2013

Valenzuela-Guerra P, Morales-Moraga D, González-Acuña D, Vianna JA. 2013. Geographic morphological variation of Gentoo penguin (Pygoscelis papua) and sex identification: using morphometric characters and molecular markers. Polar Biology. 36:1723–1734.

2012

Trinca CS, Rosas FCW, De Thoisy B, Waldemarin HF, Koepfli K-P, Vianna JA, Eizirik E. 2012. Phylogeography and demographic history of the Neotropical otter (Lontra longicaudis). Journal of Heredity, 103(4):479–492.

Parr L, Santos FR, Waycott M, Vianna JA, McDonald B, Caballero S, Souza MJ. 2012. Sirenian genetics and demography In: Ellen M. Hines, John E. Reynolds III, Lemnuel Aragones, Antonio A. Mignucci-Giannoni & Miriam Marmontel. Conservation: Issues and Strategies in Developing Countries. University Press of Florida. ISBN-10: 0813037611, ISBN-13: 978-0813037615

2011

Sallaberry-Pincheira N, Garin CF, Gonzalez-Acuña DA, Sallaberry MA, Vianna JA 2011. Genetic divergence of Chilean long-tailed snake (Philodryas chamissonis) across latitudes: conservation threats for different lineages. Diversity and Distributions, 17: 152–162.

Fuentes-Hurtado, M.; Marín, J. C.; González-Acuña, D.; Verdugo, C.; Vidal, F.; Vianna, J.A. 2011.Molecular divergence between insular and continental Pudu deer (Pudu puda) populations in the Chilean Patagonia. Studies on Neotropical Fauna and Environment. 46(1): 23–33.

Vianna, J.A.; Medina-Vogel, G.; Chehébar, C.; Olavarría, C.; Sielfeld, V.; Faugeron. S. 2011. Phylogeography of Patagonian otter (Lontra provocax): evidence of adaptive divergence to marine habitat or signature of southern glacial refugia? BMC Evolutionary Biology. 11:53.

Silva-Rodríguez, E.; Aleuy, O. A. Fuentes-Hurtado, M.; Vianna, J.A.; Vidal, F.; Jiménez, J.E. 2011. Priorities for the conservation of the pudu (Pudu puda) in southern South America. Animal Production Science. 51:375–377.

2010

Vianna, J.A.; Ayerdi, P.; Medina-Vogel, G.; Mangel, J.C.; Zeballos, H.; Apaza, M.; Faugeron, S. 2010. Phylogeography of the marine otter (Lontra felina): historical and contemporary factors determining its distribution. Journal of Heredity. 101(6):676–689.

Caballero S, Heimeier D, Trujillo F, Vianna J, Barrios Garrido H, Montiel MG, Beltran S, Marmontel M, Santos M, Rossi Santos M. 2010. Initial description of Major Histocompatibility Complex variation at two Class II loci (DQA-DQB) in Sotalia fluviatilis and Sotalia guianensis. Latin American Journal of Aquatic Mammals ISSN: 1676-7497, vol:1 fasc: n/a págs: 1 – 10.

Caballero S, Heimeier D, Trujillo F, Vianna J, Barrios Garrido H, Montiel MG, Beltran S, Marmontel M, Santos M, Rossi Santos, M.; Santos, F. 2010. Mitochondrial DNA diversity, differentiation and phylogeography of the South American riverine and coastal dolphins Sotalia fluviatilis and Sotalia guianensis. Latin American Journal of Aquatic Mammals ISSN: 1676-7497, vol:1 fasc: N/A págs: 11 – 20.

Vianna, J. A. ; Hollatz, C. ; Marmontel, M. ; Redondo, R.A.F. ; Santos, F. R. . 2010. Amazon River Dolphin: High Phylopatry due to Restricted Dispersion at Large and Short Distances. In: Manuel Ruiz-Garcia; Joseph Mark Shostell. (Org.). Biology, Evolution, and Conservation of River Dolphins Within South America and Asia: Unknown Dolphins In Danger. 1 ed. New York, EUA: Nova Science Publisher, Chapter 6. pp. 101-116, ISBN-13: 978-1608766338

Caballero,S.; Trujillo, F.; Ruiz-García, M.; Vianna, J.A.; Marmontel, M. Santos, F.R.; Baker, C. S. 2010. Population structure and phylogeography of tucuxi dolphins (Sotalia fluviatilis). In: Manuel Ruiz-Garcia; Joseph Mark Shostell. (Org.). Biology, Evolution, and Conservation of River Dolphins Within South America and Asia: Unknown Dolphins In Danger. 1 ed. New York, EUA: Nova Science Publisher, Chapter 15. pp. 285-297, ISBN-13: 978-1608766338

2009

Muschett, G.; Bonacic, C.; Vianna, J. A. 2009. A non-invasive sampling method for genetic analysis of the west-indian manatee (Trichechus manatus). Marine Mammal Science. 25(4): 955-963.

2008

Medina-Vogel, G.; Merino, L.O.; Monsalve Alarcón, R.; Vianna, J.A. 2008. Coastal–marine discontinuities, critical patch size and isolation: implications for marine otter conservation. Animal Conservation. 11:57-64.

Galetti Jr., P.M.; Rodrigues, F. P., Solé-Cava, A.M., Miyaki, C.Y., Carvalho, D., Eizirik, E., Veasey, E.A., Santos, F.R., Farias, I.P., Vianna, J.A., et al. 2008. Genética da conservação na biodiversidade brasileira. Pp.199-229. In: Fundamentos de Genética da Conservação. Frankham, R., Ballou, J.D., Briscoe, D.A., Ribeirão Preto, SP, Editora SBG, 280p. ISBN: 978-85-89265-08-9.

2007

Caballero, S.; Trujillo, F.; Vianna, J.A.; Barrios-Garrido, H.; Montiel, M.G.; Beltrán-Pedreros, S.; Marmontel, M.; Santos, M.C.O.; Rossi, M.R.; Santos, F.R.; Baker, C.S. 2007. Taxonomic status of South American coastal and riverine dolphins Sotalia spp., with insights into cetacean molecular systematics. Marine Mammal Science. 23(2):358-386.

2006

Vianna, J.A.; Bonde, R.K.; Caballero, S.; Giraldo, J.P.; Lima, R.P.; Clark, A.M.; Marmontel, M.; Morales-Vela, B.; de Sousa, M.J.; Parr, L.; Rodríguez-Lopez, M.; Mignucci-Giannoni, A.A.; Powell, J.;Santos, F.R. 2006. Phylogeography, Phylogeny and Hybridization in trichechids sirenians: implications for manatee conservation. Molecular Ecology, 15:433-447.

Vianna, J.A.; Santos, F.R.; Lima, R.P.; Luna, F.O.; Lazzarini, S.M.; Souza, M.J. 2006. Peixes-Bois: Esforços de Conservação no Brasil. Ciência Hoje. 39(230): 32-37.